Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | HY78_RS09955 | Not Available | Negative | 2050366 - 2051073 | 25240.3 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HY78_RS09960 | Not Available | Negative | 2051165 - 2052022 | 30336.8 |
| duf2312 domain-containing protein | HY78_RS09965 | Not Available | Negative | 2052235 - 2052498 | 9947.12 |
| pyruvate kinase | HY78_RS09970 | Not Available | Positive | 2052691 - 2054148 | 52274.5 |
| amidase | HY78_RS09975 | Not Available | Negative | 2054300 - 2055865 | 55182.4 |
| s10 family serine carboxypeptidase-like protein | HY78_RS09980 | Not Available | Positive | 2055884 - 2057623 | 62852.4 |
| hypothetical protein | HY78_RS09985 | Not Available | Negative | 2057755 - 2058123 | 11559.6 |
| had-ia family hydrolase | HY78_RS09990 | Not Available | Negative | 2058582 - 2059163 | 21212.2 |
| type b 50s ribosomal protein l36 | HY78_RS09995 | Not Available | Negative | 2059234 - 2059359 | 5096.3 |
| duf4136 domain-containing protein | HY78_RS10000 | Not Available | Positive | 2059521 - 2060270 | 26780.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
