Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | HY78_RS09905 | Not Available | Positive | 2038008 - 2038694 | 25747.6 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | HY78_RS09910 | Not Available | Positive | 2038847 - 2039335 | 16842.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | HY78_RS09915 | Not Available | Positive | 2039338 - 2040405 | 37786.1 |
| hypothetical protein | HY78_RS09920 | Not Available | Negative | 2040557 - 2040865 | 10942.3 |
| m16 family metallopeptidase | HY78_RS09925 | Not Available | Negative | 2040862 - 2043765 | 103547.0 |
| atp-dependent chaperone clpb | HY78_RS09930 | Not Available | Positive | 2044066 - 2046645 | 93752.5 |
| hpt domain-containing protein | HY78_RS09935 | Not Available | Negative | 2046785 - 2047210 | 15626.7 |
| sulfurtransferase tusa family protein | HY78_RS09940 | Not Available | Negative | 2047371 - 2047589 | 7480.15 |
| ribosome biogenesis gtpase der | HY78_RS09945 | Not Available | Negative | 2047589 - 2048953 | 49438.2 |
| pqq-like beta-propeller repeat protein | HY78_RS09950 | Not Available | Negative | 2049027 - 2050361 | 46354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
