Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HY78_RS09755 | Not Available | Negative | 2007933 - 2008154 | 7812.84 |
| hypothetical protein | HY78_RS09760 | Not Available | Negative | 2008151 - 2008522 | 13406.2 |
| lysr family transcriptional regulator | HY78_RS09765 | Not Available | Positive | 2008664 - 2009512 | 30655.8 |
| duf6306 domain-containing protein | HY78_RS09770 | Not Available | Positive | 2009509 - 2010000 | 17799.4 |
| is30 family transposase | HY78_RS09775 | Not Available | Positive | 2010151 - 2011149 | 38616.4 |
| chloride channel protein | HY78_RS09780 | Not Available | Negative | 2011208 - 2012989 | 61933.7 |
| marr family winged helix-turn-helix transcriptional regulator | HY78_RS09785 | Not Available | Positive | 2013081 - 2013506 | 15375.5 |
| cystathionine gamma-synthase | HY78_RS09790 | Not Available | Positive | 2013710 - 2014882 | 40954.0 |
| hypothetical protein | HY78_RS09795 | Not Available | Positive | 2014908 - 2015144 | 8481.8 |
| duf488 domain-containing protein | HY78_RS09800 | Not Available | Positive | 2015158 - 2015529 | 13729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
