Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Rhizorhabdaceae
Genus
Rhizorhabdus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Rhizorhabdaceae |
| Genus | Rhizorhabdus |
| Species | Rhizorhabdus wittichii |
| Strain | DC-6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhizorhabdus wittichii DC-6 chromosome, complete genome.
Gene Summary
Adenine Count
959558 bp
Thymine Count
956503 bp
Guanine Count
2003659 bp
Cytosine Count
2001332 bp
Genome Length
5921052 bp
Protein-coding Genes
5416 genes
Non-Coding Genes
170 genes
# of Chromosomes/Plasmids
8
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase, putative | HY78_RS08030 | Not Available | Negative | 1674623 - 1676278 | 61987.9 |
| Gst-loxp-cre recombinase fusion protein | HY78_RS08035 | Not Available | Positive | 1676486 - 1677691 | 43545.6 |
| hypothetical protein | HY78_RS08040 | Not Available | Positive | 1677706 - 1677900 | 7087.59 |
| Transposase is26 | HY78_RS08045 | Not Available | Positive | 1677866 - 1678630 | 29684.0 |
| glutathione s-transferase | HY78_RS08050 | Not Available | Negative | 1678602 - 1678685 | 3130.84 |
| Tn5041 transposase | HY78_RS08055 | Not Available | Positive | 1678685 - 1678951 | 9982.02 |
| Gp6 | HY78_RS08060 | Not Available | Positive | 1679094 - 1679960 | 32170.6 |
| Transposase | HY78_RS08065 | Not Available | Negative | 1680334 - 1680501 | 6633.97 |
| Transposase | HY78_RS08070 | Not Available | Positive | 1680558 - 1681781 | 45751.0 |
| Transposase | HY78_RS08075 | Not Available | Negative | 1681826 - 1682737 | 33710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
