Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysylphosphatidylglycerol synthase domain-containing protein | VAPA_RS00055 | Not Available | Negative | 10523 - 11494 | 35552.4 |
| cardiolipin synthase clsb | VAPA_RS00060 | Not Available | Negative | 11598 - 12866 | 47763.9 |
| endonuclease/exonuclease/phosphatase family protein | VAPA_RS00065 | Not Available | Negative | 12900 - 13682 | 28795.8 |
| hypothetical protein | VAPA_RS00070 | Not Available | Positive | 13886 - 14314 | 14656.3 |
| spy/cpxp family protein refolding chaperone | VAPA_RS00075 | Not Available | Negative | 14399 - 14971 | 20447.2 |
| flavodoxin family protein | VAPA_RS00080 | Not Available | Negative | 15122 - 16213 | 40379.7 |
| pirin family protein | VAPA_RS00085 | Not Available | Negative | 16289 - 17188 | 32749.7 |
| gnat family n-acetyltransferase | VAPA_RS00090 | Not Available | Negative | 17268 - 18020 | 27633.6 |
| biosynthetic peptidoglycan transglycosylase | VAPA_RS00095 | Not Available | Negative | 18017 - 19213 | 42867.5 |
| hypothetical protein | VAPA_RS00100 | Not Available | Negative | 19302 - 19871 | 21169.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
