Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | VAPA_RS00005 | Not Available | Positive | 101 - 1480 | 51461.9 |
| dna polymerase iii subunit beta | VAPA_RS00010 | Not Available | Positive | 1570 - 2676 | 40341.8 |
| dna topoisomerase (atp-hydrolyzing) subunit b | VAPA_RS00015 | Not Available | Positive | 2811 - 5435 | 96021.5 |
| duf4124 domain-containing protein | VAPA_RS34365 | Not Available | Negative | 5445 - 6107 | 23941.9 |
| hypothetical protein | VAPA_RS00025 | Not Available | Negative | 6160 - 6429 | 9231.58 |
| hypothetical protein | VAPA_RS00030 | Not Available | Positive | 6731 - 7243 | 18202.2 |
| hypothetical protein | VAPA_RS00035 | Not Available | Positive | 7373 - 7861 | 17122.6 |
| metallophosphoesterase | VAPA_RS00040 | Not Available | Positive | 7994 - 9241 | 44737.6 |
| polyhydroxyalkanoate granule-associated phasin | VAPA_RS00045 | Not Available | Negative | 9255 - 9752 | 17319.8 |
| acyloxyacyl hydrolase | VAPA_RS00050 | Not Available | Positive | 9951 - 10526 | 20745.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
