Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail protein b | VAPA_RS21980 | Not Available | Negative | 4709690 - 4713274 | 124438.0 |
| Hypothetical protein | VAPA_RS21985 | Not Available | Negative | 4713277 - 4713672 | 14026.9 |
| Tail tape measure protein | VAPA_RS21990 | Not Available | Negative | 4713675 - 4716395 | 92349.1 |
| Virion associated protein | VAPA_RS21995 | Not Available | Negative | 4716510 - 4717298 | 27978.2 |
| hypothetical protein | VAPA_RS22000 | Not Available | Negative | 4717319 - 4717729 | 14316.2 |
| Putative head-tail attachment protein | VAPA_RS22005 | Not Available | Negative | 4717732 - 4718028 | 10168.2 |
| Major capsid protein | VAPA_RS22010 | Not Available | Negative | 4718042 - 4719055 | 37024.2 |
| Hypothetical protein | VAPA_RS22015 | Not Available | Negative | 4719094 - 4719471 | 12714.1 |
| Capsid component | VAPA_RS22020 | Not Available | Negative | 4719507 - 4720859 | 46148.1 |
| Portal protein | VAPA_RS33605 | Not Available | Negative | 4720856 - 4722484 | 59917.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
