Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | VAPA_RS35375 | Not Available | Positive | 1322376 - 1322549 | 6639.66 |
| transposase | VAPA_RS33380 | Not Available | Positive | 1322558 - 1322806 | 9212.28 |
| transposase | VAPA_RS34750 | Not Available | Negative | 1323103 - 1323267 | 6071.34 |
| transposase | VAPA_RS34760 | Not Available | Negative | 1323527 - 1323868 | 13285.1 |
| helix-turn-helix domain-containing protein | VAPA_RS34355 | Not Available | Negative | 1324122 - 1324442 | 11434.7 |
| helix-turn-helix domain-containing protein | VAPA_RS33395 | Not Available | Positive | 1324669 - 1325232 | 20166.4 |
| yhcg family protein | VAPA_RS33400 | Not Available | Negative | 1325712 - 1326875 | 44044.9 |
| is3 family transposase | VAPA_RS33410 | Not Available | Positive | 1327864 - 1329425 | 57864.9 |
| hypothetical protein | VAPA_RS33420 | Not Available | Positive | 1330001 - 1331098 | 40766.9 |
| nucleotidyl transferase abieii/abigii toxin family protein | VAPA_RS33425 | Not Available | Positive | 1331098 - 1332000 | 32949.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
