Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | VAPA_RS33245 | Not Available | Negative | 1298335 - 1299906 | 57026.1 |
| deda family protein | VAPA_RS34990 | Not Available | Negative | 1299813 - 1300337 | 19176.4 |
| is5 family transposase | VAPA_RS33250 | Not Available | Positive | 1300496 - 1301608 | 41542.1 |
| is5 family transposase | VAPA_RS34325 | Not Available | Negative | 1301634 - 1302445 | 30298.9 |
| higa family addiction module antitoxin | VAPA_RS33260 | Not Available | Negative | 1302614 - 1302862 | 9161.06 |
| type ii toxin-antitoxin system rele/pare family toxin | VAPA_RS33265 | Not Available | Negative | 1302904 - 1303173 | 10269.3 |
| ardc family protein | VAPA_RS33270 | Not Available | Positive | 1304007 - 1304951 | 34272.0 |
| lysr family transcriptional regulator | VAPA_RS33275 | Not Available | Positive | 1305343 - 1305723 | 13690.5 |
| hypothetical protein | VAPA_RS33280 | Not Available | Negative | 1306007 - 1306396 | 13737.0 |
| hypothetical protein | VAPA_RS35360 | Not Available | Negative | 1306706 - 1307005 | 10461.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
