Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS33105 | Not Available | Negative | 1271176 - 1272156 | 34035.7 |
| duf899 domain-containing protein | VAPA_RS33110 | Not Available | Positive | 1272307 - 1273104 | 30282.4 |
| trimeric intracellular cation channel family protein | VAPA_RS33115 | Not Available | Negative | 1273139 - 1273747 | 21240.7 |
| fmn-binding negative transcriptional regulator | VAPA_RS33120 | Not Available | Negative | 1273758 - 1274402 | 23363.2 |
| hypothetical protein | VAPA_RS33125 | Not Available | Negative | 1274449 - 1275216 | 28238.0 |
| aac(3)-i family aminoglycoside n-acetyltransferase | VAPA_RS33130 | Not Available | Negative | 1275223 - 1275702 | 17450.9 |
| atp-binding protein | VAPA_RS33135 | Not Available | Negative | 1275753 - 1277738 | 72691.3 |
| lysr substrate-binding domain-containing protein | VAPA_RS33140 | Not Available | Negative | 1278009 - 1278917 | 33079.4 |
| abc transporter substrate-binding protein | VAPA_RS33145 | Not Available | Positive | 1279103 - 1280155 | 37895.7 |
| abc transporter atp-binding protein | VAPA_RS33150 | Not Available | Positive | 1280162 - 1281229 | 39070.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
