Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | VAPA_RS32960 | Not Available | Positive | 1239299 - 1240745 | 55034.4 |
| hypothetical protein | VAPA_RS35350 | Not Available | Negative | 1241089 - 1241637 | 19638.5 |
| hypothetical protein | VAPA_RS35355 | Not Available | Negative | 1241612 - 1242418 | 29385.7 |
| is21-like element helper atpase istb | VAPA_RS32970 | Not Available | Negative | 1242812 - 1243576 | 28799.8 |
| is21 family transposase | VAPA_RS32975 | Not Available | Negative | 1243573 - 1245186 | 60243.6 |
| transposase | VAPA_RS35575 | Not Available | Positive | 1245152 - 1245749 | 21143.2 |
| helix-turn-helix transcriptional regulator | VAPA_RS32985 | Not Available | Negative | 1245781 - 1246644 | 32086.4 |
| indoleacetamide hydrolase | VAPA_RS32990 | Not Available | Positive | 1246815 - 1248221 | 47796.4 |
| substrate-binding domain-containing protein | VAPA_RS32995 | Not Available | Positive | 1248268 - 1249416 | 39995.7 |
| branched-chain amino acid abc transporter permease | VAPA_RS33000 | Not Available | Positive | 1249424 - 1250278 | 29957.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
