Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| muconate cycloisomerase family protein | VAPA_RS32810 | Not Available | Positive | 1210927 - 1212120 | 43015.8 |
| muconolactone delta-isomerase | VAPA_RS32815 | Not Available | Positive | 1212123 - 1212401 | 10494.6 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS32820 | Not Available | Positive | 1212438 - 1213424 | 34459.7 |
| helix-turn-helix domain-containing protein | VAPA_RS32825 | Not Available | Negative | 1213628 - 1213807 | 6940.47 |
| hypothetical protein | VAPA_RS34720 | Not Available | Positive | 1214090 - 1214350 | 9555.18 |
| is1380 family transposase | VAPA_RS32830 | Not Available | Negative | 1214608 - 1215921 | 48891.4 |
| hypothetical protein | VAPA_RS34725 | Not Available | Positive | 1216452 - 1216628 | 6454.65 |
| hypothetical protein | VAPA_RS32840 | Not Available | Positive | 1216749 - 1217534 | 29071.5 |
| hypothetical protein | VAPA_RS32845 | Not Available | Positive | 1217751 - 1218023 | 9369.12 |
| hypothetical protein | VAPA_RS32850 | Not Available | Positive | 1218322 - 1218831 | 18604.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
