Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ompa family protein | VAPA_RS29590 | Not Available | Negative | 510423 - 511256 | 30118.7 |
| yada family autotransporter adhesin | VAPA_RS35290 | Not Available | Negative | 511286 - 511687 | 12962.3 |
| espr-type extended signal peptide-containing protein | VAPA_RS29595 | Not Available | Negative | 511699 - 517734 | 192305.0 |
| duf4019 domain-containing protein | VAPA_RS29600 | Not Available | Negative | 518510 - 518977 | 17057.6 |
| tetratricopeptide repeat protein | VAPA_RS29605 | Not Available | Positive | 519237 - 521468 | 81775.5 |
| gfa family protein | VAPA_RS29610 | Not Available | Positive | 521538 - 521891 | 13061.8 |
| elongation factor g | VAPA_RS29615 | Not Available | Positive | 522011 - 524071 | 73710.4 |
| molybdopterin-dependent oxidoreductase | VAPA_RS29620 | Not Available | Negative | 524113 - 526416 | 84187.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS29625 | Not Available | Negative | 526447 - 527439 | 34240.6 |
| m14 family metallopeptidase | VAPA_RS29630 | Not Available | Negative | 527525 - 528538 | 35477.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
