Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyacid dehydrogenase | VAPA_RS26720 | Not Available | Negative | 5722037 - 5723008 | 34503.6 |
| abc transporter atp-binding protein | VAPA_RS26725 | Not Available | Negative | 5723008 - 5724666 | 59264.4 |
| abc transporter permease | VAPA_RS26730 | Not Available | Negative | 5724663 - 5725514 | 30418.1 |
| abc transporter permease | VAPA_RS26735 | Not Available | Negative | 5725511 - 5726482 | 34757.7 |
| abc transporter substrate-binding protein | VAPA_RS26740 | Not Available | Negative | 5726523 - 5728091 | 57495.2 |
| class ii aldolase/adducin family protein | VAPA_RS26745 | Not Available | Negative | 5728185 - 5728976 | 28833.2 |
| pirin family protein | VAPA_RS26750 | Not Available | Negative | 5729291 - 5730151 | 30483.1 |
| doxx family protein | VAPA_RS26755 | Not Available | Negative | 5730184 - 5730564 | 12891.3 |
| lysr family transcriptional regulator | VAPA_RS26760 | Not Available | Positive | 5730650 - 5731582 | 33143.1 |
| gntr family transcriptional regulator | VAPA_RS26765 | Not Available | Negative | 5731590 - 5732273 | 25672.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
