Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transducing protein | VAPA_RS26355 | Not Available | Negative | 5639844 - 5640149 | 11459.7 |
| duf3717 domain-containing protein | VAPA_RS26360 | Not Available | Negative | 5640163 - 5640627 | 17533.3 |
| terc family protein | VAPA_RS26365 | Not Available | Positive | 5641113 - 5641859 | 26245.0 |
| hypothetical protein | VAPA_RS26370 | Not Available | Positive | 5641941 - 5642402 | 16929.4 |
| phage holin family protein | VAPA_RS26375 | Not Available | Positive | 5642488 - 5642841 | 12210.8 |
| m48 family metalloprotease | VAPA_RS26380 | Not Available | Negative | 5642871 - 5644436 | 56428.0 |
| cyclic pyranopterin monophosphate synthase moac | VAPA_RS26385 | Not Available | Positive | 5644491 - 5644982 | 16867.6 |
| pgll family o-oligosaccharyltransferase | VAPA_RS26390 | Not Available | Negative | 5644979 - 5646709 | 61611.1 |
| type iv pilin protein | VAPA_RS26395 | Not Available | Positive | 5646868 - 5647347 | 16996.8 |
| gsph/fimt family pseudopilin | VAPA_RS26400 | Not Available | Positive | 5647355 - 5647966 | 21087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
