Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS26060 | Not Available | Negative | 5568767 - 5569267 | 18466.0 |
| peptide deformylase | VAPA_RS26065 | Not Available | Negative | 5569264 - 5569785 | 19283.4 |
| lysm peptidoglycan-binding domain-containing protein | VAPA_RS26070 | Not Available | Positive | 5569946 - 5571166 | 44353.4 |
| dna-processing protein dpra | VAPA_RS26075 | Not Available | Positive | 5571208 - 5572356 | 39385.1 |
| duf494 family protein | VAPA_RS26080 | Not Available | Positive | 5572507 - 5573025 | 18899.3 |
| duf1631 family protein | VAPA_RS26085 | Not Available | Negative | 5573037 - 5575430 | 86093.1 |
| protein translocase subunit secf | VAPA_RS26090 | Not Available | Negative | 5575570 - 5576526 | 34964.8 |
| protein translocase subunit secd | VAPA_RS26095 | Not Available | Negative | 5576545 - 5578428 | 67638.2 |
| preprotein translocase subunit yajc | VAPA_RS26100 | Not Available | Negative | 5578530 - 5578865 | 11684.6 |
| indolepyruvate ferredoxin oxidoreductase family protein | VAPA_RS26105 | Not Available | Negative | 5579139 - 5582747 | 131741.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
