Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | VAPA_RS26010 | Not Available | Negative | 5560214 - 5561119 | 33408.7 |
| voc family protein | VAPA_RS26015 | Not Available | Positive | 5561206 - 5561754 | 20121.9 |
| alpha/beta hydrolase | VAPA_RS26020 | Not Available | Positive | 5561747 - 5562868 | 40602.4 |
| fad-dependent oxidoreductase | VAPA_RS26025 | Not Available | Positive | 5562876 - 5564528 | 60244.8 |
| duf2783 domain-containing protein | VAPA_RS26030 | Not Available | Positive | 5564525 - 5564728 | 6958.24 |
| mbl fold metallo-hydrolase | VAPA_RS26035 | Not Available | Positive | 5564725 - 5565702 | 35546.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS26040 | Not Available | Positive | 5565743 - 5566714 | 34275.0 |
| azld domain-containing protein | VAPA_RS26045 | Not Available | Negative | 5566742 - 5567080 | 12239.2 |
| azlc family abc transporter permease | VAPA_RS26050 | Not Available | Negative | 5567077 - 5567817 | 26696.1 |
| methionyl-trna formyltransferase | VAPA_RS26055 | Not Available | Negative | 5567817 - 5568770 | 33422.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
