Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotidine-5'-phosphate decarboxylase | VAPA_RS25910 | Not Available | Negative | 5540590 - 5541414 | 29248.9 |
| uracil-dna glycosylase family protein | VAPA_RS25915 | Not Available | Negative | 5541447 - 5542229 | 26718.2 |
| ribosomal protein s18-alanine n-acetyltransferase | VAPA_RS25920 | Not Available | Negative | 5542226 - 5542768 | 20033.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | VAPA_RS25925 | Not Available | Negative | 5542765 - 5543487 | 24538.6 |
| dmt family transporter | VAPA_RS25930 | Not Available | Negative | 5543480 - 5544496 | 35072.6 |
| deor/glpr family dna-binding transcription regulator | VAPA_RS25935 | Not Available | Negative | 5544563 - 5545327 | 26165.8 |
| gdp-mannose pyrophosphatase nudk | VAPA_RS25940 | Not Available | Positive | 5545407 - 5545994 | 22002.2 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | VAPA_RS25945 | Not Available | Positive | 5546003 - 5547433 | 50790.0 |
| alpha/beta hydrolase family protein | VAPA_RS25950 | Not Available | Positive | 5547562 - 5549145 | 54129.1 |
| l-threonylcarbamoyladenylate synthase | VAPA_RS25955 | Not Available | Negative | 5549269 - 5550270 | 34984.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
