Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS25860 | Not Available | Negative | 5531738 - 5532106 | 12976.9 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS25865 | Not Available | Positive | 5532244 - 5533026 | 27433.8 |
| duf3597 domain-containing protein | VAPA_RS25870 | Not Available | Negative | 5533161 - 5533541 | 12807.5 |
| zinc ribbon domain-containing protein | VAPA_RS25875 | Not Available | Negative | 5533635 - 5534756 | 41699.1 |
| duf2145 domain-containing protein | VAPA_RS25880 | Not Available | Negative | 5534785 - 5535582 | 28912.9 |
| hypothetical protein | VAPA_RS25885 | Not Available | Negative | 5535579 - 5536013 | 13605.5 |
| yiaa/yiab family inner membrane protein | VAPA_RS25890 | Not Available | Negative | 5536078 - 5536581 | 18343.2 |
| mfs transporter | VAPA_RS25895 | Not Available | Negative | 5536730 - 5538688 | 70529.6 |
| hypothetical protein | VAPA_RS25900 | Not Available | Negative | 5538844 - 5539701 | 30424.3 |
| helix-turn-helix domain-containing protein | VAPA_RS25905 | Not Available | Positive | 5539843 - 5540577 | 27810.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
