Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | VAPA_RS25715 | Not Available | Positive | 5509353 - 5510978 | 58308.3 |
| rida family protein | VAPA_RS25720 | Not Available | Positive | 5510975 - 5511373 | 14621.7 |
| Trna-met | Not Available | Not Available | Positive | 5511497 - 5511573 | Not Available |
| 50s ribosomal protein l17 | VAPA_RS25730 | Not Available | Negative | 5511592 - 5511990 | 14912.4 |
| dna-directed rna polymerase subunit alpha | VAPA_RS25735 | Not Available | Negative | 5512080 - 5513069 | 36184.6 |
| 30s ribosomal protein s4 | VAPA_RS25740 | Not Available | Negative | 5513209 - 5513832 | 23511.2 |
| 30s ribosomal protein s11 | VAPA_RS25745 | Not Available | Negative | 5513963 - 5514367 | 14142.9 |
| 30s ribosomal protein s13 | VAPA_RS25750 | Not Available | Negative | 5514380 - 5514745 | 13801.0 |
| 50s ribosomal protein l36 | VAPA_RS34095 | Not Available | Negative | 5514769 - 5514882 | 4280.44 |
| preprotein translocase subunit secy | VAPA_RS25755 | Not Available | Negative | 5514957 - 5516270 | 47270.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
