Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | VAPA_RS25665 | Not Available | Positive | 5499216 - 5499638 | 15493.9 |
| sdr family oxidoreductase | VAPA_RS25670 | Not Available | Negative | 5499642 - 5500403 | 25796.9 |
| lysr family transcriptional regulator | VAPA_RS25675 | Not Available | Positive | 5500520 - 5501446 | 33488.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS25680 | Not Available | Positive | 5501510 - 5502526 | 35131.4 |
| duf1840 domain-containing protein | VAPA_RS25685 | Not Available | Negative | 5502636 - 5502959 | 11942.3 |
| sam-dependent methyltransferase | VAPA_RS25690 | Not Available | Negative | 5502972 - 5504240 | 47056.3 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | VAPA_RS25695 | Not Available | Positive | 5504358 - 5506736 | 87632.7 |
| marr family winged helix-turn-helix transcriptional regulator | VAPA_RS25700 | Not Available | Positive | 5506823 - 5507299 | 18140.9 |
| enoyl-coa hydratase family protein | VAPA_RS25705 | Not Available | Positive | 5507296 - 5508150 | 30595.9 |
| acyl-coa dehydrogenase family protein | VAPA_RS25710 | Not Available | Positive | 5508154 - 5509347 | 42295.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
