Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | VAPA_RS25615 | Not Available | Negative | 5486334 - 5487110 | 28079.3 |
| sugar abc transporter permease | VAPA_RS25620 | Not Available | Negative | 5487334 - 5488524 | 42072.8 |
| d-xylose abc transporter substrate-binding protein | VAPA_RS25625 | Not Available | Negative | 5488650 - 5489672 | 35926.3 |
| voc family protein | VAPA_RS25630 | Not Available | Positive | 5489925 - 5490356 | 15803.8 |
| amino acid abc transporter substrate-binding protein | VAPA_RS25635 | Not Available | Positive | 5490482 - 5491276 | 28162.9 |
| lysr family transcriptional regulator | VAPA_RS25640 | Not Available | Positive | 5491345 - 5492211 | 31376.5 |
| pepsy domain-containing protein | VAPA_RS25645 | Not Available | Negative | 5492205 - 5494763 | 92603.8 |
| tonb-dependent siderophore receptor | VAPA_RS25650 | Not Available | Negative | 5494816 - 5496930 | 75744.2 |
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | VAPA_RS25655 | Not Available | Positive | 5497144 - 5498169 | 35065.4 |
| alpha-ketoacid dehydrogenase subunit beta | VAPA_RS25660 | Not Available | Positive | 5498299 - 5499204 | 31819.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
