Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type 1 glutamine amidotransferase domain-containing protein | VAPA_RS25565 | Not Available | Negative | 5470997 - 5471566 | 20350.5 |
| is1380 family transposase | VAPA_RS25570 | Not Available | Negative | 5471794 - 5473107 | 48873.4 |
| m48 family metalloprotease | VAPA_RS35555 | Not Available | Negative | 5473303 - 5474493 | 42844.8 |
| tripartite tricarboxylate transporter substrate-binding protein | VAPA_RS25580 | Not Available | Positive | 5474700 - 5475674 | 34182.6 |
| carboxypeptidase-like regulatory domain-containing protein | VAPA_RS25585 | Not Available | Negative | 5475752 - 5477869 | 72633.5 |
| helix-turn-helix transcriptional regulator | VAPA_RS25590 | Not Available | Positive | 5478050 - 5479030 | 36571.5 |
| pqq-dependent dehydrogenase, methanol/ethanol family | VAPA_RS25595 | Not Available | Negative | 5479048 - 5481141 | 75349.1 |
| helix-turn-helix domain-containing protein | VAPA_RS25600 | Not Available | Positive | 5481296 - 5482579 | 45950.8 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | VAPA_RS25605 | Not Available | Negative | 5482584 - 5485034 | 86535.9 |
| rok family transcriptional regulator | VAPA_RS25610 | Not Available | Negative | 5485151 - 5486314 | 40299.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
