Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| k(+)-transporting atpase subunit f | VAPA_RS25470 | Not Available | Negative | 5454774 - 5454872 | 3454.38 |
| hypothetical protein | VAPA_RS35455 | Not Available | Negative | 5454869 - 5454994 | 4118.03 |
| helix-turn-helix transcriptional regulator | VAPA_RS25475 | Not Available | Positive | 5455171 - 5455839 | 24443.6 |
| superoxide dismutase | VAPA_RS25480 | Not Available | Positive | 5455878 - 5456459 | 21420.2 |
| voc family protein | VAPA_RS25485 | Not Available | Negative | 5456484 - 5456861 | 13668.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS25490 | Not Available | Positive | 5457118 - 5458095 | 34369.6 |
| mbl fold metallo-hydrolase | VAPA_RS25495 | Not Available | Positive | 5458157 - 5459206 | 36916.2 |
| hypothetical protein | VAPA_RS25500 | Not Available | Negative | 5459219 - 5459476 | 9751.67 |
| sdr family nad(p)-dependent oxidoreductase | VAPA_RS25505 | Not Available | Negative | 5459499 - 5460263 | 26818.2 |
| hypothetical protein | VAPA_RS25510 | Not Available | Negative | 5460325 - 5460795 | 16968.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
