Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | VAPA_RS25420 | Not Available | Negative | 5442232 - 5443053 | 30565.3 |
| mgdg synthase family glycosyltransferase | VAPA_RS25425 | Not Available | Positive | 5443197 - 5444336 | 40726.7 |
| hypothetical protein | VAPA_RS25430 | Not Available | Positive | 5444333 - 5444824 | 18663.7 |
| tyrosine-protein phosphatase | VAPA_RS25435 | Not Available | Positive | 5444821 - 5445396 | 21094.6 |
| zinc-binding dehydrogenase | VAPA_RS25440 | Not Available | Positive | 5445498 - 5446628 | 39702.0 |
| two-component system response regulator kdpe | VAPA_RS25445 | Not Available | Negative | 5446782 - 5447480 | 25386.4 |
| duf4118 domain-containing protein | VAPA_RS25450 | Not Available | Negative | 5447485 - 5450244 | 98187.1 |
| potassium-transporting atpase subunit kdpc | VAPA_RS25455 | Not Available | Negative | 5450262 - 5450852 | 19979.9 |
| potassium-transporting atpase subunit kdpb | VAPA_RS25460 | Not Available | Negative | 5450863 - 5452962 | 73655.4 |
| potassium-transporting atpase subunit kdpa | VAPA_RS25465 | Not Available | Negative | 5452973 - 5454772 | 62742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
