Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | VAPA_RS25320 | Not Available | Positive | 5421345 - 5422187 | 30755.2 |
| marr family winged helix-turn-helix transcriptional regulator | VAPA_RS25325 | Not Available | Positive | 5422365 - 5422820 | 16892.7 |
| organic hydroperoxide resistance protein | VAPA_RS25330 | Not Available | Positive | 5422917 - 5423342 | 14315.1 |
| duf2855 family protein | VAPA_RS25335 | Not Available | Positive | 5423528 - 5424646 | 40532.7 |
| serine/threonine protein kinase | VAPA_RS25340 | Not Available | Positive | 5424680 - 5425714 | 38675.8 |
| lysr family transcriptional regulator | VAPA_RS25345 | Not Available | Negative | 5425705 - 5426607 | 33130.3 |
| acyl-coa dehydrogenase family protein | VAPA_RS25350 | Not Available | Positive | 5426698 - 5428407 | 62252.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS25355 | Not Available | Positive | 5428436 - 5429422 | 34257.4 |
| caib/baif coa transferase family protein | VAPA_RS25360 | Not Available | Positive | 5429586 - 5430731 | 40458.4 |
| lysr family transcriptional regulator | VAPA_RS25365 | Not Available | Negative | 5430726 - 5431631 | 32090.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
