Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp nucleosidase | VAPA_RS25270 | Not Available | Positive | 5411415 - 5412932 | 56481.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS25275 | Not Available | Positive | 5413083 - 5414042 | 32885.9 |
| arsr/smtb family transcription factor | VAPA_RS25280 | Not Available | Negative | 5414053 - 5414763 | 25344.3 |
| cytochrome p450 | VAPA_RS25285 | Not Available | Positive | 5414847 - 5416022 | 41018.4 |
| pyridoxamine 5'-phosphate oxidase family protein | VAPA_RS25290 | Not Available | Negative | 5416041 - 5417012 | 34810.1 |
| glutathione s-transferase family protein | VAPA_RS25295 | Not Available | Negative | 5417009 - 5417671 | 23690.6 |
| lysr family transcriptional regulator | VAPA_RS25300 | Not Available | Positive | 5417795 - 5418685 | 32587.7 |
| hypothetical protein | VAPA_RS25305 | Not Available | Negative | 5418702 - 5419379 | 23600.4 |
| hypothetical protein | VAPA_RS25310 | Not Available | Negative | 5419376 - 5420227 | 29797.0 |
| atp-binding cassette domain-containing protein | VAPA_RS25315 | Not Available | Positive | 5420382 - 5421332 | 34611.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
