Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent phosphoribosylglycinamide formyltransferase | VAPA_RS25170 | Not Available | Negative | 5388936 - 5390150 | 42945.6 |
| 3-hydroxybutyryl-coa dehydrogenase | VAPA_RS25175 | Not Available | Positive | 5390337 - 5391185 | 29734.6 |
| crotonase/enoyl-coa hydratase family protein | VAPA_RS25180 | Not Available | Positive | 5391222 - 5392037 | 29410.6 |
| serine hydrolase domain-containing protein | VAPA_RS25185 | Not Available | Positive | 5392087 - 5393379 | 46798.7 |
| type iii pantothenate kinase | VAPA_RS25190 | Not Available | Negative | 5393386 - 5394168 | 27463.1 |
| peptidoglycan-binding protein lysm | VAPA_RS25195 | Not Available | Positive | 5394303 - 5394764 | 15879.8 |
| rhodanese-like domain-containing protein | VAPA_RS25200 | Not Available | Negative | 5395026 - 5395439 | 14763.4 |
| trap transporter substrate-binding protein | VAPA_RS25205 | Not Available | Positive | 5395657 - 5396772 | 40600.8 |
| trap transporter small permease subunit | VAPA_RS25210 | Not Available | Positive | 5396862 - 5397482 | 23334.6 |
| trap transporter large permease subunit | VAPA_RS25215 | Not Available | Positive | 5397479 - 5399437 | 68998.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
