Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marc family protein | VAPA_RS25120 | Not Available | Positive | 5378703 - 5379356 | 22863.9 |
| eve domain-containing protein | VAPA_RS25125 | Not Available | Negative | 5379362 - 5379823 | 17044.5 |
| abc transporter substrate-binding protein | VAPA_RS25130 | Not Available | Negative | 5379987 - 5381150 | 42668.4 |
| amp-dependent synthetase/ligase | VAPA_RS25135 | Not Available | Negative | 5381183 - 5383063 | 69672.1 |
| abc transporter atp-binding protein | VAPA_RS25140 | Not Available | Negative | 5383071 - 5383844 | 28651.9 |
| abc transporter atp-binding protein | VAPA_RS25145 | Not Available | Negative | 5384047 - 5384874 | 30097.3 |
| branched-chain amino acid abc transporter permease | VAPA_RS25150 | Not Available | Negative | 5384871 - 5385947 | 38682.2 |
| branched-chain amino acid abc transporter permease | VAPA_RS25155 | Not Available | Negative | 5386042 - 5386917 | 30659.2 |
| helix-turn-helix domain-containing protein | VAPA_RS25160 | Not Available | Negative | 5386933 - 5387763 | 30152.2 |
| alpha/beta hydrolase | VAPA_RS25165 | Not Available | Negative | 5387874 - 5388818 | 33649.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
