Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l3 | VAPA_RS25020 | Not Available | Negative | 5360263 - 5360943 | 23718.5 |
| hypothetical protein | VAPA_RS25025 | Not Available | Negative | 5361188 - 5361724 | 17883.5 |
| hypothetical protein | VAPA_RS25030 | Not Available | Negative | 5361739 - 5363325 | 54446.3 |
| 30s ribosomal protein s10 | VAPA_RS25035 | Not Available | Negative | 5363473 - 5363787 | 11834.6 |
| elongation factor tu | VAPA_RS25040 | Not Available | Negative | 5363809 - 5365002 | 43071.9 |
| elongation factor g | VAPA_RS25045 | Not Available | Negative | 5365144 - 5367243 | 77318.9 |
| 30s ribosomal protein s7 | VAPA_RS25050 | Not Available | Negative | 5367340 - 5367813 | 18037.2 |
| 30s ribosomal protein s12 | VAPA_RS25055 | Not Available | Negative | 5367970 - 5368347 | 13962.1 |
| d-alanyl-d-alanine carboxypeptidase family protein | VAPA_RS25060 | Not Available | Negative | 5368520 - 5369689 | 41986.0 |
| alpha/beta hydrolase | VAPA_RS25065 | Not Available | Negative | 5369734 - 5370366 | 22203.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
