Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | VAPA_RS24820 | Not Available | Negative | 5329620 - 5331173 | 55291.6 |
| f0f1 atp synthase subunit delta | VAPA_RS24825 | Not Available | Negative | 5331222 - 5331752 | 18322.1 |
| f0f1 atp synthase subunit b | VAPA_RS24830 | Not Available | Negative | 5331761 - 5332231 | 16781.3 |
| f0f1 atp synthase subunit c | VAPA_RS24835 | Not Available | Negative | 5332309 - 5332575 | 9097.56 |
| f0f1 atp synthase subunit a | VAPA_RS24840 | Not Available | Negative | 5332633 - 5333502 | 31629.1 |
| atp synthase subunit i | VAPA_RS24845 | Not Available | Negative | 5333507 - 5333992 | 17631.8 |
| d-amino acid aminotransferase | VAPA_RS24850 | Not Available | Positive | 5334150 - 5335043 | 32160.9 |
| duf493 family protein | VAPA_RS24855 | Not Available | Positive | 5335040 - 5335354 | 11505.7 |
| lipoyl(octanoyl) transferase lipb | VAPA_RS24860 | Not Available | Positive | 5335377 - 5336057 | 24614.6 |
| lipoyl synthase | VAPA_RS24865 | Not Available | Positive | 5336065 - 5337048 | 36682.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
