Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3617 domain-containing protein | VAPA_RS24765 | Not Available | Negative | 5318754 - 5319281 | 18577.8 |
| phosphatase pap2 family protein | VAPA_RS24770 | Not Available | Negative | 5319362 - 5320069 | 25685.7 |
| gfo/idh/moca family protein | VAPA_RS24775 | Not Available | Negative | 5320119 - 5321282 | 41762.6 |
| substrate-binding domain-containing protein | VAPA_RS24780 | Not Available | Negative | 5321284 - 5322246 | 34494.5 |
| abc transporter permease | VAPA_RS24785 | Not Available | Negative | 5322290 - 5323291 | 34562.2 |
| sugar abc transporter atp-binding protein | VAPA_RS24790 | Not Available | Negative | 5323278 - 5324816 | 55353.1 |
| rok family protein | VAPA_RS24795 | Not Available | Negative | 5324813 - 5325982 | 40862.7 |
| f0f1 atp synthase subunit epsilon | VAPA_RS24805 | Not Available | Negative | 5326758 - 5327177 | 14776.7 |
| f0f1 atp synthase subunit beta | VAPA_RS24810 | Not Available | Negative | 5327190 - 5328590 | 50283.4 |
| f0f1 atp synthase subunit gamma | VAPA_RS24815 | Not Available | Negative | 5328723 - 5329598 | 31469.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
