Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | VAPA_RS24715 | Not Available | Negative | 5308728 - 5310383 | 61628.4 |
| ligase-associated dna damage response exonuclease | VAPA_RS24720 | Not Available | Negative | 5310380 - 5311528 | 41111.6 |
| lysr family transcriptional regulator | VAPA_RS24725 | Not Available | Positive | 5311599 - 5312504 | 32733.1 |
| ring-opening amidohydrolase | VAPA_RS24730 | Not Available | Positive | 5312643 - 5313815 | 39464.5 |
| fad-dependent oxidoreductase | VAPA_RS24735 | Not Available | Positive | 5313979 - 5315193 | 43014.6 |
| voc family protein | VAPA_RS24740 | Not Available | Positive | 5315190 - 5315702 | 17927.3 |
| abc transporter substrate-binding protein | VAPA_RS24745 | Not Available | Positive | 5315733 - 5316740 | 35527.1 |
| abc transporter atp-binding protein | VAPA_RS24750 | Not Available | Positive | 5316749 - 5317582 | 31609.4 |
| abc transporter permease | VAPA_RS24755 | Not Available | Positive | 5317579 - 5318355 | 27870.8 |
| oxalurate catabolism protein hpxz | VAPA_RS24760 | Not Available | Positive | 5318364 - 5318753 | 14508.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
