Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | VAPA_RS24665 | Not Available | Positive | 5298911 - 5300026 | 40715.0 |
| abc transporter permease | VAPA_RS24670 | Not Available | Positive | 5300023 - 5300928 | 32144.6 |
| abc transporter permease | VAPA_RS24675 | Not Available | Positive | 5300925 - 5301743 | 29448.0 |
| hypothetical protein | VAPA_RS24680 | Not Available | Negative | 5301740 - 5302513 | 27984.1 |
| lema family protein | VAPA_RS24685 | Not Available | Positive | 5302566 - 5303159 | 22180.3 |
| tpm domain-containing protein | VAPA_RS24690 | Not Available | Positive | 5303171 - 5304079 | 30401.7 |
| tpm domain-containing protein | VAPA_RS24695 | Not Available | Positive | 5304082 - 5304606 | 19446.2 |
| ligase-associated dna damage response endonuclease pdem | VAPA_RS24700 | Not Available | Negative | 5304710 - 5305405 | 24740.7 |
| thioredoxin trxc | VAPA_RS24705 | Not Available | Positive | 5305482 - 5305931 | 16161.4 |
| ligase-associated dna damage response dexh box helicase | VAPA_RS24710 | Not Available | Negative | 5305942 - 5308731 | 101048.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
