Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator rutr | VAPA_RS24615 | Not Available | Negative | 5289013 - 5289759 | 27560.5 |
| isopenicillin n synthase family dioxygenase | VAPA_RS24620 | Not Available | Positive | 5289955 - 5290959 | 36767.6 |
| voc family protein | VAPA_RS24625 | Not Available | Positive | 5290962 - 5291348 | 14392.3 |
| bmp family abc transporter substrate-binding protein | VAPA_RS24630 | Not Available | Positive | 5291416 - 5292522 | 39323.0 |
| abc transporter atp-binding protein | VAPA_RS24635 | Not Available | Positive | 5292541 - 5294073 | 53923.9 |
| abc transporter permease | VAPA_RS24640 | Not Available | Positive | 5294066 - 5295217 | 41392.3 |
| abc transporter permease | VAPA_RS24645 | Not Available | Positive | 5295214 - 5296146 | 32306.4 |
| cysteine hydrolase family protein | VAPA_RS24650 | Not Available | Positive | 5296143 - 5296847 | 26064.0 |
| isopenicillin n synthase family dioxygenase | VAPA_RS24655 | Not Available | Positive | 5296854 - 5297828 | 35675.6 |
| abc transporter substrate-binding protein | VAPA_RS24660 | Not Available | Positive | 5297868 - 5298914 | 38374.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
