Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS24515 | Not Available | Negative | 5269853 - 5270851 | 35121.8 |
| m20 family metallopeptidase | VAPA_RS24520 | Not Available | Negative | 5270878 - 5272047 | 40704.8 |
| murr/rpir family transcriptional regulator | VAPA_RS24525 | Not Available | Positive | 5272150 - 5273082 | 33279.8 |
| restriction endonuclease | VAPA_RS24530 | Not Available | Negative | 5273135 - 5273752 | 23002.4 |
| hypothetical protein | VAPA_RS24535 | Not Available | Negative | 5273927 - 5274484 | 20837.0 |
| Trna-arg | Not Available | Not Available | Positive | 5274709 - 5274783 | Not Available |
| tetr family transcriptional regulator | VAPA_RS24545 | Not Available | Negative | 5274827 - 5275498 | 24373.1 |
| efflux rnd transporter periplasmic adaptor subunit | VAPA_RS24550 | Not Available | Positive | 5275680 - 5276969 | 44012.7 |
| efflux rnd transporter permease subunit | VAPA_RS24555 | Not Available | Positive | 5276986 - 5280150 | 112587.0 |
| efflux transporter outer membrane subunit | VAPA_RS24560 | Not Available | Positive | 5280143 - 5281567 | 50547.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
