Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sis domain-containing protein | VAPA_RS24465 | Not Available | Negative | 5261021 - 5261665 | 21816.0 |
| yran family protein | VAPA_RS24470 | Not Available | Negative | 5261741 - 5262113 | 13516.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | VAPA_RS24475 | Not Available | Positive | 5262160 - 5263116 | 33058.2 |
| iclr family transcriptional regulator | VAPA_RS24480 | Not Available | Negative | 5263126 - 5263965 | 29272.8 |
| tripartite tricarboxylate transporter substrate binding protein | VAPA_RS24485 | Not Available | Positive | 5264065 - 5265057 | 34792.9 |
| class i adenylate-forming enzyme family protein | VAPA_RS24490 | Not Available | Positive | 5265095 - 5266609 | 54150.2 |
| citryl-coa lyase | VAPA_RS24495 | Not Available | Positive | 5266627 - 5267409 | 27528.5 |
| glutathione s-transferase | VAPA_RS24500 | Not Available | Negative | 5267413 - 5268144 | 27154.1 |
| fmn-dependent nadh-azoreductase | VAPA_RS24505 | Not Available | Negative | 5268198 - 5268830 | 23435.3 |
| lysr family transcriptional regulator | VAPA_RS24510 | Not Available | Positive | 5268935 - 5269822 | 31303.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
