Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | VAPA_RS24115 | Not Available | Positive | 5180335 - 5181321 | 35617.8 |
| abc transporter atp-binding protein | VAPA_RS24120 | Not Available | Positive | 5181333 - 5182163 | 30459.3 |
| abc transporter permease | VAPA_RS24125 | Not Available | Positive | 5182160 - 5182963 | 28896.5 |
| fad-binding oxidoreductase | VAPA_RS24130 | Not Available | Positive | 5182974 - 5184347 | 49758.1 |
| apolipoprotein n-acyltransferase | VAPA_RS24135 | Not Available | Negative | 5184367 - 5185956 | 56199.6 |
| hlyc/corc family transporter | VAPA_RS24140 | Not Available | Negative | 5185956 - 5186834 | 32215.3 |
| gnat family n-acetyltransferase | VAPA_RS24145 | Not Available | Negative | 5186924 - 5187652 | 26759.2 |
| lrp/asnc family transcriptional regulator | VAPA_RS24150 | Not Available | Negative | 5187762 - 5188235 | 17726.6 |
| 4-hydroxyphenylpyruvate dioxygenase | VAPA_RS24155 | Not Available | Positive | 5188393 - 5189520 | 41734.7 |
| transporter substrate-binding domain-containing protein | VAPA_RS24160 | Not Available | Positive | 5189549 - 5190343 | 28597.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
