Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | VAPA_RS24015 | Not Available | Negative | 5160331 - 5161287 | 35662.9 |
| lysophospholipid acyltransferase family protein | VAPA_RS24020 | Not Available | Negative | 5161342 - 5162115 | 28970.1 |
| d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphatase | VAPA_RS24025 | Not Available | Negative | 5162115 - 5162708 | 20943.3 |
| glycine--trna ligase subunit beta | VAPA_RS24030 | Not Available | Negative | 5162728 - 5164866 | 75984.7 |
| glycine--trna ligase subunit alpha | VAPA_RS24035 | Not Available | Negative | 5164870 - 5165775 | 34363.7 |
| diacylglycerol/lipid kinase family protein | VAPA_RS24040 | Not Available | Positive | 5166025 - 5166990 | 34738.1 |
| metallophosphoesterase family protein | VAPA_RS24045 | Not Available | Positive | 5166987 - 5167811 | 29420.2 |
| phosphatase pap2 family protein | VAPA_RS24050 | Not Available | Positive | 5167822 - 5168643 | 29250.3 |
| asparaginase | VAPA_RS24055 | Not Available | Negative | 5168762 - 5169832 | 37656.1 |
| tetr family transcriptional regulator c-terminal domain-containing protein | VAPA_RS24060 | Not Available | Positive | 5169985 - 5170662 | 25069.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
