Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine-rich repeat-containing protein kinase family protein | VAPA_RS23965 | Not Available | Negative | 5148383 - 5149693 | 46496.2 |
| mbl fold metallo-hydrolase | VAPA_RS23970 | Not Available | Negative | 5149703 - 5150782 | 39807.8 |
| merr family transcriptional regulator | VAPA_RS23975 | Not Available | Positive | 5150904 - 5151302 | 14789.9 |
| carbonate dehydratase | VAPA_RS23980 | Not Available | Positive | 5151342 - 5152106 | 27599.8 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | VAPA_RS23985 | Not Available | Positive | 5152111 - 5153931 | 70365.1 |
| acetyl-coa c-acyltransferase | VAPA_RS23990 | Not Available | Positive | 5153986 - 5155170 | 40889.6 |
| glutamate carboxypeptidase | VAPA_RS23995 | Not Available | Positive | 5155255 - 5156505 | 44157.7 |
| acyl-coa dehydrogenase family protein | VAPA_RS24000 | Not Available | Positive | 5156544 - 5157674 | 40133.8 |
| ychj family protein | VAPA_RS24005 | Not Available | Positive | 5157761 - 5158189 | 15986.7 |
| phosphomethylpyrimidine synthase thic | VAPA_RS24010 | Not Available | Positive | 5158408 - 5160294 | 69422.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
