Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4126 domain-containing protein | VAPA_RS23915 | Not Available | Negative | 5137975 - 5138646 | 23468.0 |
| enoyl-coa hydratase/isomerase family protein | VAPA_RS23920 | Not Available | Negative | 5138656 - 5139444 | 28136.9 |
| carboxyl transferase domain-containing protein | VAPA_RS23925 | Not Available | Negative | 5139577 - 5141208 | 58156.9 |
| amp-binding protein | VAPA_RS23930 | Not Available | Negative | 5141205 - 5142875 | 61551.4 |
| isovaleryl-coa dehydrogenase | VAPA_RS23935 | Not Available | Negative | 5143035 - 5144207 | 42434.6 |
| arac family transcriptional regulator | VAPA_RS23940 | Not Available | Positive | 5144347 - 5145375 | 38691.5 |
| thioredoxin family protein | VAPA_RS23945 | Not Available | Negative | 5145407 - 5145733 | 11803.1 |
| had family hydrolase | VAPA_RS23950 | Not Available | Negative | 5145831 - 5146523 | 24697.6 |
| sdr family oxidoreductase | VAPA_RS23955 | Not Available | Negative | 5146623 - 5147393 | 27006.4 |
| pseudouridine synthase | VAPA_RS23960 | Not Available | Negative | 5147475 - 5148386 | 34192.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
