Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | VAPA_RS23865 | Not Available | Negative | 5128530 - 5129450 | 32607.3 |
| acylphosphatase | VAPA_RS23870 | Not Available | Negative | 5129586 - 5129888 | 10684.6 |
| acyl-coa dehydrogenase family protein | VAPA_RS23875 | Not Available | Negative | 5129900 - 5131069 | 42389.9 |
| caib/baif coa transferase family protein | VAPA_RS23880 | Not Available | Negative | 5131066 - 5132292 | 43548.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS23885 | Not Available | Negative | 5132289 - 5133299 | 35231.9 |
| cupin domain-containing protein | VAPA_RS23890 | Not Available | Negative | 5133326 - 5133709 | 14041.8 |
| iclr family transcriptional regulator | VAPA_RS23895 | Not Available | Negative | 5133715 - 5134452 | 27069.8 |
| 2-hydroxyacid dehydrogenase | VAPA_RS23900 | Not Available | Negative | 5134632 - 5135552 | 33753.9 |
| ethd family reductase | VAPA_RS23905 | Not Available | Positive | 5135668 - 5135982 | 11376.8 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | VAPA_RS23910 | Not Available | Negative | 5135979 - 5137982 | 72312.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
