Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| agmatinase | VAPA_RS23820 | Not Available | Positive | 5114143 - 5115099 | 33835.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | VAPA_RS23825 | Not Available | Positive | 5115138 - 5116616 | 52584.0 |
| excinuclease abc subunit uvra | VAPA_RS23830 | Not Available | Negative | 5116656 - 5122409 | 208547.0 |
| abc transporter substrate-binding protein | VAPA_RS23835 | Not Available | Positive | 5122581 - 5123687 | 38702.7 |
| abc transporter substrate-binding protein | VAPA_RS23840 | Not Available | Positive | 5123836 - 5124951 | 39081.4 |
| hypothetical protein | VAPA_RS34925 | Not Available | Negative | 5124970 - 5125116 | 5026.08 |
| mfs transporter | VAPA_RS23845 | Not Available | Negative | 5125237 - 5126931 | 60772.0 |
| 2-hydroxychromene-2-carboxylate isomerase | VAPA_RS23850 | Not Available | Negative | 5127098 - 5127742 | 23734.4 |
| duf1289 domain-containing protein | VAPA_RS23855 | Not Available | Negative | 5127739 - 5128005 | 9769.53 |
| ybak/ebsc family protein | VAPA_RS23860 | Not Available | Negative | 5128010 - 5128498 | 17287.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
