Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlya family rna methyltransferase | VAPA_RS23720 | Not Available | Negative | 5091471 - 5092262 | 28032.4 |
| adenosylhomocysteinase | VAPA_RS23725 | Not Available | Negative | 5092263 - 5093702 | 52001.4 |
| tigr01841 family phasin | VAPA_RS23730 | Not Available | Positive | 5094133 - 5094621 | 17684.3 |
| arm dna-binding domain-containing protein | VAPA_RS23735 | Not Available | Positive | 5094959 - 5095888 | 35419.9 |
| type ii toxin-antitoxin system hipa family toxin | VAPA_RS23740 | Not Available | Negative | 5096273 - 5097553 | 46930.6 |
| helix-turn-helix domain-containing protein | VAPA_RS23745 | Not Available | Negative | 5097543 - 5097884 | 12258.8 |
| peptide chain release factor 3 | VAPA_RS23750 | Not Available | Positive | 5098216 - 5099853 | 60688.9 |
| abc transporter permease | VAPA_RS23755 | Not Available | Negative | 5099858 - 5100661 | 28503.5 |
| abc transporter permease | VAPA_RS23760 | Not Available | Negative | 5100806 - 5101648 | 29762.1 |
| atp-binding cassette domain-containing protein | VAPA_RS23765 | Not Available | Negative | 5101645 - 5102640 | 36517.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
