Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine--trna ligase | VAPA_RS23670 | Not Available | Negative | 5081939 - 5083171 | 45031.0 |
| m23 family metallopeptidase | VAPA_RS23675 | Not Available | Positive | 5083330 - 5084670 | 47624.0 |
| anhydro-n-acetylmuramic acid kinase | VAPA_RS23680 | Not Available | Positive | 5084702 - 5085829 | 38439.8 |
| multidrug transporter subunit mdtd | VAPA_RS23685 | Not Available | Negative | 5085842 - 5087272 | 49961.8 |
| iron-sulfur cluster insertion protein erpa | VAPA_RS23690 | Not Available | Negative | 5087368 - 5087733 | 12923.1 |
| 30s ribosomal protein s9 | VAPA_RS23695 | Not Available | Negative | 5087913 - 5088305 | 14293.2 |
| 50s ribosomal protein l13 | VAPA_RS23700 | Not Available | Negative | 5088318 - 5088749 | 15717.2 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | VAPA_RS23705 | Not Available | Positive | 5088969 - 5089919 | 34228.1 |
| septal ring lytic transglycosylase rlpa family protein | VAPA_RS23710 | Not Available | Negative | 5089944 - 5090546 | 21348.6 |
| methylenetetrahydrofolate reductase | VAPA_RS23715 | Not Available | Negative | 5090636 - 5091460 | 29825.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
