Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2/dual specificity phosphatase family protein | VAPA_RS23570 | Not Available | Positive | 5062991 - 5064340 | 50273.6 |
| hypothetical protein | VAPA_RS23575 | Not Available | Positive | 5064333 - 5064773 | 15528.2 |
| lysophospholipid acyltransferase family protein | VAPA_RS23580 | Not Available | Positive | 5064770 - 5065483 | 25986.4 |
| phosphatidate cytidylyltransferase | VAPA_RS23585 | Not Available | Positive | 5065480 - 5066433 | 34831.3 |
| ydei/ompd-associated family protein | VAPA_RS23590 | Not Available | Positive | 5066421 - 5067050 | 23240.7 |
| crp/fnr family transcriptional regulator | VAPA_RS23595 | Not Available | Negative | 5067066 - 5067689 | 22877.2 |
| porin | VAPA_RS23600 | Not Available | Positive | 5067973 - 5069034 | 37300.0 |
| acetate--coa ligase family protein | VAPA_RS23605 | Not Available | Positive | 5069043 - 5071160 | 72793.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS23610 | Not Available | Positive | 5071232 - 5072191 | 33564.8 |
| duf1254 domain-containing protein | VAPA_RS23615 | Not Available | Positive | 5072241 - 5073629 | 50165.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
