Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna oxidative demethylase alkb | VAPA_RS23520 | Not Available | Negative | 5053036 - 5053698 | 23962.5 |
| plp-dependent aminotransferase family protein | VAPA_RS23525 | Not Available | Negative | 5053695 - 5055149 | 52160.9 |
| duf2970 domain-containing protein | VAPA_RS23530 | Not Available | Positive | 5055248 - 5055436 | 6483.29 |
| c-type cytochrome | VAPA_RS23535 | Not Available | Positive | 5055433 - 5056164 | 25680.2 |
| c-type cytochrome | VAPA_RS23540 | Not Available | Positive | 5056172 - 5057461 | 45335.9 |
| udp-2,3-diacylglucosamine diphosphatase | VAPA_RS23545 | Not Available | Negative | 5057487 - 5058356 | 32975.3 |
| cdf family co(ii)/ni(ii) efflux transporter dmef | VAPA_RS23550 | Not Available | Negative | 5058447 - 5059400 | 34641.7 |
| holliday junction branch migration dna helicase ruvb | VAPA_RS23555 | Not Available | Negative | 5059407 - 5060471 | 39000.1 |
| cdp-alcohol phosphatidyltransferase family protein | VAPA_RS23560 | Not Available | Positive | 5060557 - 5061159 | 21402.4 |
| bifunctional alpha/beta hydrolase/class i sam-dependent methyltransferase | VAPA_RS23565 | Not Available | Positive | 5061202 - 5062971 | 65697.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
