Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | VAPA_RS23420 | Not Available | Negative | 5032856 - 5034463 | 56741.9 |
| fis family transcriptional regulator | VAPA_RS23425 | Not Available | Negative | 5034480 - 5034716 | 9088.16 |
| trna dihydrouridine synthase dusb | VAPA_RS23430 | Not Available | Negative | 5034737 - 5035795 | 38508.2 |
| yqaa family protein | VAPA_RS23435 | Not Available | Positive | 5035977 - 5036447 | 17159.6 |
| glutathione s-transferase | VAPA_RS23440 | Not Available | Negative | 5036458 - 5037132 | 24804.1 |
| redox-regulated atpase ychf | VAPA_RS23445 | Not Available | Negative | 5037639 - 5038730 | 39444.2 |
| sugar abc transporter substrate-binding protein | VAPA_RS23450 | Not Available | Positive | 5038964 - 5039920 | 33121.5 |
| sugar abc transporter atp-binding protein | VAPA_RS23455 | Not Available | Positive | 5039959 - 5041578 | 58215.9 |
| abc transporter permease | VAPA_RS23460 | Not Available | Positive | 5041575 - 5042558 | 33071.2 |
| laci family dna-binding transcriptional regulator | VAPA_RS23465 | Not Available | Positive | 5042581 - 5043684 | 39377.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
