Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | VAPA_RS23370 | Not Available | Negative | 5022905 - 5025217 | 81557.5 |
| chemotaxis protein chew | VAPA_RS23375 | Not Available | Negative | 5025260 - 5025793 | 18938.5 |
| pled family two-component system response regulator | VAPA_RS23380 | Not Available | Negative | 5025813 - 5026178 | 13533.5 |
| pled family two-component system response regulator | VAPA_RS23385 | Not Available | Negative | 5026179 - 5026577 | 14707.8 |
| rubredoxin | VAPA_RS23390 | Not Available | Negative | 5026659 - 5026829 | 6256.46 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | VAPA_RS23395 | Not Available | Positive | 5026940 - 5027905 | 34568.4 |
| glutamate-1-semialdehyde 2,1-aminomutase | VAPA_RS23400 | Not Available | Positive | 5027905 - 5029191 | 45200.5 |
| amidase family protein | VAPA_RS23405 | Not Available | Negative | 5029203 - 5030603 | 49462.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | VAPA_RS23410 | Not Available | Negative | 5030649 - 5031626 | 33823.1 |
| lysr substrate-binding domain-containing protein | VAPA_RS23415 | Not Available | Positive | 5031786 - 5032682 | 32903.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
