Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | B4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
950862 bp
Thymine Count
949414 bp
Guanine Count
1945675 bp
Cytosine Count
1949310 bp
Genome Length
5795261 bp
Protein-coding Genes
5451 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VAPA_RS34575 | Not Available | Positive | 5001117 - 5002067 | 36333.6 |
| hypothetical protein | VAPA_RS34580 | Not Available | Positive | 5001992 - 5002567 | 20793.6 |
| site-specific integrase | VAPA_RS23295 | Not Available | Negative | 5002706 - 5003332 | 22773.7 |
| is21 family transposase | VAPA_RS23300 | Not Available | Positive | 5003503 - 5005116 | 60494.9 |
| is21-like element helper atpase istb | VAPA_RS23305 | Not Available | Positive | 5005113 - 5005877 | 28804.9 |
| yran family protein | VAPA_RS34920 | Not Available | Positive | 5006057 - 5006180 | 4531.35 |
| arac family transcriptional regulator | VAPA_RS23310 | Not Available | Negative | 5006690 - 5007637 | 34332.2 |
| duf4242 domain-containing protein | VAPA_RS23315 | Not Available | Positive | 5007766 - 5008038 | 9942.82 |
| hypothetical protein | VAPA_RS34080 | Not Available | Negative | 5008147 - 5008365 | 7847.44 |
| lysophospholipid acyltransferase family protein | VAPA_RS23320 | Not Available | Negative | 5009058 - 5009804 | 27505.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
